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Presentations and Tutorials at 'Big Data Training School for Life Sciences'

21 Sep, 2017

The pharmb.io and caramba.clinic teams were heavily involved in the COST-CHARME ‘Big Data Training School for Life Sciences’, 18-22 September 2017 in Uppsala, Sweden.

Ola Spjuth was member of the Scientific Committee and also had a presentation with the title ‘Data-intensive bioinformatics on HPC and Cloud’.

Marco Capuccini had a hands-on tutorial with the title ‘Machine learning in Spark’.

Payam Emami, Stephanie Herman, and Jon Ander Novella held presentations ‘Large-scale clinical metabolomics using mass spectrometry’ and ‘Scalable and reproducible workflows with Pachyderm’, followed by a hands-on tutorial using the PhenoMeNal framework to carry out an analysis of mass spectrometry data in parallel using the Pachyderm workflow system on top of Kubernetes.

Ola Spjuth presenting ‘Data-intensive bioinformatics on HPC and Cloud’.

Stephanie Herman, and Jon Ander Novella presenting ‘Large-scale clinical metabolomics using mass spectrometry’

Jon Ander Novella presenting ‘Scalable and reproducible workflows with Pachyderm’.